I would simply like to take the end residue of a simple peptide and
connect it with a peptide bond to the first residue in the chain making
a cyclopeptide. In Xplor, the patch command is as follows:
patch PEPT
reference="+"=(resid 1)
reference="-"=(resid 6)
end
Can anyone please tell me how to "translate" this into Charmm input?
Thanks a bunch,
Alain Laederach