In article <evans-1410981829400001 at 199.106.180.104>, evans at funtv.com (Mark
Evans) wrote:
> Hello,
>> My company is interested in putting together an in-house system that would
> be able to identify quality ORF's from assembled public human EST/GenBank
> data. One of the main problems, as always, is budget limitations. We
> would like to be able to build such a system from publicly available or
> low cost software. In other words, we want to take something like Unigene,
> clean it up, generate consesi, check for the presence of full length ORF
> and sort full length vs. not yet full length. What search programs,
> contig assembly programs etc. would work best?
>Let me see if I have this straight: you and your company want to
cannibalize someone else's code and you want us to tell you where to look
for it.
Is that right?
LoL
_____
Jerry Learn
Research Associate
Health Sci. Ctr., Rm. K443-C |
Dept. of Microbiology | Learn at u.washington.edu
University of Washington | Phone: (206) 616-4286
Box 357740 | FAX: (206) 616-1575
Seattle, WA 98195-7740 USA |
