Jonathan Epstein wrote:
>> I am looking for some software to produce attractive proteins alignments
> suitable for publication. It possible, this software should run on a
> Macintosh or a Web-based platform.
May I suggest MacBoxShade, which is designed to do just this. Output is
in EPSF, PS, PICT, RTF and ASCII formats, lots of options, Mac-type user
interface, complete control of colours used. Input is GCG/ClustalW MSF
file format.
I think it is pretty cool, but then I would, as I am the author ;-)
ftp://ulrec3.unil.ch/pub/boxshade/MacBoxshade
I have also posted it to Don Gilbert's iubio archive in the states, but
I haven't checked where exactly it is filed. If you have problems
getting hold of it, drop me a line.
Michael
+*+*+*+*+*+*+*+*+*+*+*+*+*+*+*+*+*+*+*+*+*+*+*+*+
Michael D. Baron Ph.D. (michael.baron at deletethis.bbsrc.ac.uk)
Senior Research Scientist
Institute for Animal Health
Ash Road,
Pirbright,
Surrey,
U.K.
