>I'm looking for software that will align multiple nucleic acid
>sequences based upon their translations into amino acid sequences.
>That is, I would like the input and output of the algorithm to be
>nucleic acid coding sequences, but I want the actual alignment to be
>determined by the amino acid sequence implied by these NA sequences.
I use Megalign, the Lasergene alignment module from DNAStar to do this
Jon Clewley
