I am very pleased to announce the latest release of ANTHEPROT (2.9) for
Windows.
The site is:
ftp.ibcp.fr
and the directory is:
/pub/ANTHEPROT/WINDOWS/Anthe2_9e.exe
ANTHEPROT (ANalyze THE PROTeins) is a package designed for protein
sequence analysis. Up to now it was available on DOS and IBMrs6000.
This program supports of different formats for sequence input:
- NBRF
- GCG
- IG/Stanford
- EMBL
- Pearson
- ...
To get the databases in Pearson format compatible with Antheprot you
may ftp to ftp.infobiogen.fr
directory
/pub/db/swissprot/SPfasta
Among the possibilities:
1) Detect sites and signatures using the PROSITE database
2) Provide an interface to the Fasta program.
3) Provide interfaces to CLUSTALV, CLUSTALW, Multalin programs
4) Contain several secondary structure predictions
5) Allows dot matrix plots.
6) Interactive graphic still supported, clipboard access, color
printings, pseudo multitasking (long work run in background mode),
and many things more...
7) Edition of multiple alignments.
8) Helical wheels with interactive helical wheel (movement along the
sequence) coupled with real-time 3D view (stereo mode, cursor,...)
9) Transmembranous regions prediction (Von Jeijne positive inside
rule)
10) Prosite documentation in a special text window when PDOC index is
clicked
11) Automatic generation of sequence file (.SEQ) from PDB coordinates
To appear in next major release 3.0
* addition of other methods (protein digestion,...)
* antigenicity prediction methods
--
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# Institut de Biologie et Chimie des Proteines. UPR 412-CNRS #
# ***** ***** **** ***** Dr Gilbert Deleage #
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# # ***** # # # 69367 Lyon Cedex 07,FRANCE #
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# # # # # # # Fax: (33) 04-72-72-26-01 #
# ***** ****** **** # deleage at ibcp.fr #
# http://www.ibcp.fr #
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