On Thu, 18 Dec 1997 14:21:54 -0500,
William Coetzee (coetzeew at is2.nyu.edu) wrote:
>Which is the best computer program to use in the molecular biology
> under linux:
> database of clones, primers
> restriction anaylsis
can't go wrong with Harry Mangalam's tacg 2.0
> multiple alignment
two good choices: dialign & clustalw/clustalx
> fragment assembly
i have used phrap/phred quite a bit
> profile anaylsis
> ORF analysis
you could try seqsee.
You should also take a look at Patrick Finerty's web pages, which
I think are at http://zifi.genetics.utah.edu for links to Linux
binaries for various programs.
Ashok Aiyar, Ph.D.
McArdle Laboratory for Cancer Research
aiyar at ebv.oncology.wisc.edu