On 16 Nov 1996 02:35:08 GMT, ipark at bioneer.kaist.ac.kr (Inyup Park)
wrote:
>: I need to know if there is any program on the net that can take a protein
>: sequence and give a sort of graphycal output of its secondary structure. I
>: currently use the method by Gardiner in PCGENE program. That gives a linear
>: representation of the secondary structure like this:
>>: xxxxxxxxxxxxx*****- - - - - xxxxx- - >>>- - xxxxx etc.,
>>: where:
>>: xxxxx = helical,
>>: ****** = coil,
>>: - - - - - = extended and
>>: >>>> = turn
>>: Does anybody knows of any program that outputs the putative secondary
>: structure structure of the protein in a graphycal form.?
try Seqaid 381, it is a dos program, but does the job, and it is
shareware or freeware.
Find it at the University of Stellenbosch FTP archive in MolBiol.
regards,
hjh
