Hector Lucero (hlucero at bu.edu) wrote:
: I need to know if there is any program on the net that can take a protein
: sequence and give a sort of graphycal output of its secondary structure. I
: currently use the method by Gardiner in PCGENE program. That gives a linear
: representation of the secondary structure like this:
: xxxxxxxxxxxxx*****- - - - - xxxxx- - >>>- - xxxxx etc.,
: xxxxx = helical,
: ****** = coil,
: - - - - - = extended and
: >>>> = turn
: Does anybody knows of any program that outputs the putative secondary
: structure structure of the protein in a graphycal form.?
: Please let me know.
: Hector Lucero
I heard xsight does the job...
However, I have never used it and probably won't...
Budget constraints... :)
Don't you hate shelling out the bucks for a piece of program
before you know exactly what it is capable of?
Good luck with your software search,