I am looking for programs to perform multiple alignments of protein
sequences plus build phylogenetic trees from these alignments in the
net.
I have found plenty of places where CLUSTALW can be used, but I have
been unable to find any place to plot the trees from the outputs of the
program (Is there any Phylip site??).
Moreover, I would like to know your opinion about how good these types
of programs are for building trees.
Thanks
Ignacio