I am looking for a freeware pairwise alignment program (for unix) which
can report percent similarity as well as percent identity, like the
'bestfit' and 'gap' programs in GCG.
I have Bill Pearson's 'align' program, but it reports identity only.
Any clues?
Thanks,
Morten Andersen
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MORTEN STIG ANDERSEN Department of Molecular Biology
Fax: +46 18 557723 Biomedical Center, University of Uppsala
Tel: +46 18 174379 BOX 590, S-751 24 Uppsala, SWEDEN
