Homology Searches?

Peter Stockwell peter at sanger.otago.ac.nz
Tue Jan 30 23:05:37 EST 1996

Dan Gebow (dgebow at hsph.harvard.edu) wrote:

> Does anyone know of any public domain software that will tell the amount 
> of homolgy between two DNA sequences (no greater than 1 KB) and where 
> the homology is?

> Thanks,
> Dan

For SIM2 try ftp ncbi.nlm.nig.gov

Several tools are packaged with the FASTA package which is available in
various places.

Peter A. Stockwell

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