Does anyone know of a database search program such as FASTA which can be
downloaded to my own computer, and use my own local databases?
I have BLAST already, but want something that emphasises on whole-length
(protein) sequences and allows introduction of gaps for optimal alignment
instead of BLAST's HSPs (high-scoring SEGMENT pairs).
MORTEN STIG ANDERSEN Department of Molecular Biology
Fax: +46 18 557723 Biomedical Center, University of Uppsala
Tel: +46 18 174215 BOX 590, S-751 24 Uppsala, SWEDEN