protein alignment display

Santi Garcia Vallve vallve at quimica.urv.es
Mon Feb 19 14:56:16 EST 1996

Edward W. Baptist (ewb at med.unc.edu) wrote:
> Is there a program which will take a protein alignment (such as a GCG msf
> file) and display all amino acids which match either a particular sequence
> or a consensus sequence and display those  as either dots or dashes while
> printing out only the ones that differ?

I think PRETTYBOX from the GCG package is better than PRETTY. It 
allows you save as a Postscrip file if you write /out=name.sci.

More information about the Bio-soft mailing list

Send comments to us at biosci-help [At] net.bio.net