In article <4566t1$gpu at winx03.informatik.uni-wuerzburg.de>,
Cornelius Krasel <krasel at wpxx02.toxi.uni-wuerzburg.de> wrote:
>David Frederiksen (David_Frederiksen at ums.supernet.ab.ca) wrote:
>> Can anyone direct me to some MAC software that will convert Gene Bank
>> formats to Phylip formats? I will use what ever is available ... anything
>> but long hand transposition.
>>I think Don Gilbert has a Mac port of his Unix program readseq available
>at ftp.bio.indiana.edu.
Before goiing straight from GENBANK files to PHYLIP, you ought to align
the sequences first, with something like ClustalW. Otherwise PHYLIP
will be casually assuming that site 1 of one sequence is aligned with
site 1 of annother.
-----
Joe Felsenstein joe at genetics.washington.edu (IP No. 128.95.12.41)
Dept. of Genetics, Univ. of Washington, Box 357360, Seattle, WA 98195-7360 USA
