I'm looking for a program that will predict the mass and sequence for all
possible peptide fragments from a given protein sequence. Can anyone
point me towards such an algorithm?
(I've done a trypsin digest of my protein of interest, and separated the
fragments. MS on one protein peak gave an apparent mass of 829 da. I now
want to figure out what amino acid sequences would be consistant with that
Thanks for any help you can give me.
Dept. of Pharmacology
College of Veterinary Medicine
Ithaca, NY 14853
(607) 253-3882 (voice)
(607) 253-3659 (fax)
alb2 at cornell.edu