Dear Anyone:
I am looking for a program that can take my aligned (homologous)
DNA sequences and create export files (text, PHYLIP, MEGA, PAUP, etc.) of
specific (or user specified) positions only. For example, only
synonymous positions, only nonsynonymous positions, only fourfold
degenerate sites, only twofold degenerate sites, etc. I know that
MEGA can make exports of only variable positions but can it do
anything like I've described above? Any assistance/information would
be greatly appreciated. Thanks in advance.
Victor DeFilippis
Wayne State University
vicdef at biology.biosci.wayne.edu
