Database search program?

Christoph Gartmann GARTMANN at IMMUNBIO.MPG.DE
Thu Jul 6 14:24:45 EST 1995

In <3tg1gk$7no at news.ccit.arizona.edu> champlin at GAS.UUG.Arizona.EDU writes:

> I am looking for a program that will go through the yeast gene database and
> retrieve this information:
> 	1.	The Name of every sequenced gene.

You could use the GCG-program NAMES to achieve this.
> 	2.	The base at the start of the translation.

You may use SRS to achieve both of the above.

> 	3.	The first 10 bases before the start of the translated region.
> 	4.	The first 12 bases after the start of the translated region.
> 	5.	Calculate the frequency of each of the four bases at each
> 		position.
I have a set of programs that does exactly this type of thing.

   Christoph Gartmann

| Max-Planck-Institut fuer      Phone   : +49-761-5108-465   Fax: -221       |
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