Hi:
I need a program (Unix, source code) which will
1. Read FASTA-formatted file with nucleotide sequences
2. Perform 6-frame translation
3. Output the protein sequences in the FASTA format.
E.g.,
>TEST sequence
aaatttgggccc
becomes
>TEST+1 sequence
KFGP
>TEST+2 sequence
....
TEST-3 sequence
AQI
Of course, I can convert from-to different formats using readseq, so not only FASTA, but other formats are o'k.
Thank you very much.
Gene Shpaer
