|>|> In article <1995Apr11.104221.1265 at reks.uia.ac.be>,
|>przemko at reks.uia.ac.be (Przemko) writes:
|> I would like to do multiple sequence alignements on samples that
|> have couple
|> thousands seqs. Let's say all transmembrane domains or all AUG
|> contexts.
You could try AMPS - see our Web site to see how to get a copy. The standard
distribution is limited to 500 sequences, but there are instructions on how
to recomplile for longer/more sequences. We've used it for up to around
800 sequences, but there is no reason I can think of that it should not
work for over 1000 sequences.
Geoff. Barton
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Geoffrey J. Barton
Laboratory of Molecular Biophysics, University of Oxford
Rex Richards Building, South Parks Road, Oxford OX1 3QU, U.K.
email: gjb at bioch.ox.ac.uk Telephone: +44 1865 275368 Fax: +44 1865 510454
anonymous-ftp: geoff.biop.ox.ac.uk WWW: http://geoff.biop.ox.ac.uk
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Geoff Barton
