I am looking for a software that gives contoured distance
plot for C-alpha atoms. As it is known this is symmetrical
about the diagonal with x and y axis being the residue
numbers. This is also used for identifying domains in
proteins. (Ref: Principles of Protein Structures by
Schulz and Schirmer, page 147)
thanks
sathya
--
B.K. Sathya
National Cancer Institute
Frederick, Maryland
sathya at ncifcrf.gov