In article <1994Sep13.153554.18325 at Princeton.EDU>, micky at berthaw.princeton.edu (Michael West) writes:
|> Does anyone know of a program which will read a protein's pdb file, and then
|> make secondary structure assignments to each amino acid? Any suggestions or
|> information would be appreciated. Thanks.
|>|> Michael micky at berthaw.princeton.edu
Despite from RASMOL and DSSP, you can use PROCHECK (should be at the PDB
ftp-server ). This does a lot of analysis of your PDB file as well as
secondary structure assignment. It produces Postscript plots of all
analysis as well as normal log-files.
Clemens
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* Clemens Vonrhein email:vonrhein at bio5.chemie.uni-freiburg.de *
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