birney at molbiol.ox.ac.uk wrote:
: Hi,
: I remember discussions/looking at a paper about someone (possibly
: in Tom Blundell's group?) who compiled substitution tables from different
: secondary and tertiary structure alignments...
: Does anyone know if these things are available anywhere? Or
: the email address of someone who would know?
These tables were most recently described in Protein Science - vol.1
no. 2. As these tables were included on the freebie disk accompanying
that issue you can obtain them from there. Alternatively the disk
material from Protein Science is archived at ftp.uci.edu... just
ftp the file Overington.tbl from protein/PSvolumes/v1n2/SUPLEMNT.
You could also try e-mailing John Overington to see if he has more
up to date tables available... e-mail to overington at pfizer.com
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