Transmembrane region prediction

risler at cgmvax.cgm.cnrs-gif.fr risler at cgmvax.cgm.cnrs-gif.fr
Mon Jan 3 05:08:07 EST 1994

>Does anyone know if there is a program out there that predicts transmembrane
>regions using the algorithm of Eisenberg, Schwarz, Komaromy and Wall (J.
>Mol. Biol. 179:125-142. (1984))?  I have a user who is interested in that
>specific algorithm.

A FORTRAN version of Eisenberg's algorithm (Eisenberg et al., PNAS 81 
(1984) 140-144) has been written by G.D. Fasman and W.A. Gilbert (see
TIBS 15 (1990) 89-92).

I've dowloaded the MOMENT program from W. Gilbert's server. Works fine. I 
can mail you the source if you wish.



  Jean-Loup Risler                      Tel:  (33 1) 69 82 31 34
  CNRS		                        Fax:  (33 1) 69 07 49 73
  Centre de Genetique Moleculaire	Email: risler at cgmvax.cgm.cnrs-gif.fr
  91198 Gif sur Yvette Cedex  France    

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