Announcing Genethon's Human Physical Map Data
WWW server
This server is an experimental WWW interface to the public part of the
physical map database hugemap. It is implemented on top of IDB, an
object-oriented persistent environment developped at Genethon for this
purpose.
The data on clones or STSs can be accessed through Dnumbers, AFM names
(for STSs) or CEPH names (or UNIX-style regular expressions matching
one of these formats). It is the same (except for more frequent
updates) as that available on ceph-genethon-map ftp server, thus you
can find:
* for STSs:
- screening results, with both positive (individually verified or
unique) and individually negative clones.
- for those clones, other STSs tested and chromosomal assignment
through Alu-PCR product hybridization.
* for clones:
- screening results.
- chromosomal assignment through Alu-PCR product hybridization.
- potentially overlapping clones, as deduced from L1 and THE
fingerprints and Alu-PCR product hybridization.
Additionally, this server provides:
* links toward the GDB gopher server for clones or STSs that have
Dnumbers.
* links toward Genethon's Human Genetic Map Data wais server for
Genethon's microsatellites: this server contains full sequence for
those STSs.
Those links are, of course, hypertext links, i.e. are accessible through
clicking on object names.
For more information and/or data and/or fun, just aim your favourite mosaic
client at URL :
http://www.genethon.fr
and click on
"CEPH/Genethon Physical Map"
or directly load:
http://www.genethon.fr/genethon_fr.html (french page)
http://www.genethon.fr/genethon_en.html (english page)
Any feedback, comment or suggestion welcome at hugemap at genethon.fr
hugemap team (Eric Viara, Stuart Pook, Emmanuel Barillot, Bruno Lacroix)
13, place de Rungis 75013 Paris
tel: (33 1) 44-16-27-20 (PPF)
fax: (33 1) 45-88-52-20
email: hugemap at genethon.fr
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Claude Scarpelli Internet : claude at genethon.fr
Human Polymorphism Study Center or : claude at cephb.fr
