I am seeking recommendations for some software programs.
1. A sequence alignment program for cDNAs. The sequence alignment program
should be able to align several sequences at once, and report on both
homologous and non-homologous regions across sequences.
2. A primer-design program able to adhere to criteria for Tm, %GC,
lack of primer-dimers, lack of hairpin loops, etc.
I welcome suggestions for programs available on the Internet,
shareware programs, public domain programs, or reasonably priced
commercial programs.
--
Chris Zarow, Ph.D
University of Southern California
Rancho Los Amigos Medical Center
zarow at molbio.usc.edu
