In <CDEpLM.7vs at usenet.ucs.indiana.edu> wfischer at bio.indiana.edu writes:
>> I need to extract given pieces of sequence from a set of EMBL/GenBank
> entries, using ranges defined in the features table. For example, I'd
> like to be able to extract, from a set of entries, the DNA sequence for
> each exon, or again for every complete CDS feature (all exons
> assembled).
>> Surely not everyone does this manually?
>> What software exists that can actually parse the (eminently parsible)
> joint features table format? Please post reviews of programs you have
> used, or mail me directly and I will summarize.
>
With Thure Etzold's SRS this can be done very easily.
Regards
Christoph Gartmann
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