In article <1992Nov21.120846.17648 at gserv1.dl.ac.uk>, Roman.Jerala at IJS.si writes:
>does anybody know of a program which, when given as input alignment of several
>sequences, adds boxes around aminoacids when more than ?% are equal (as you can
>often see in publcations). I would prefer version for PC or SGI and ftp-able
You could try BOXSHADE. It is available by FTP from
BIOMED.BIOLAN.UNI-KOELN.DE and a couple of other ftp-servers.
There are versions for VAX/VMS and for MSDOS.