Jim Studier writes:
> Where can I find promoter sequences in machine readable form?
> I would like them aligned if possible.
> Thanx,
> Jim Studier
The database you are looking for is The Euk. Promoter Database (EPD). Below is
a listing of sites around the world where you can get it by anonymous ftp.
Best of Luck,
Dan Jacobson
danj at jhuhyg.sph.jhu.edu
=============================================================================
Host fly.bio.indiana.edu
Location: /molbio/data
FILE -rw-r--r-- 94156 May 14 1991 euk-promoter.dat
FILE -rw-r--r-- 46615 May 14 1991 euk-promoter.doc
Host modl.unibas.ch
Location: /biology/database
DIRECTORY drwxr-xr-x 512 Sep 18 17:44 epd
Location: /biology/database/epd
FILE -rw-r--r-- 240952 Dec 27 12:47 epd.dat
FILE -rw-r--r-- 49665 Dec 27 12:47 epduser.txt
Host ncbi.nlm.nih.gov
Location: /repository/EPD/asn
FILE -rw-r--r-- 1154526 Aug 30 00:41 epd28.asn
FILE -rw-r--r-- 388444 Aug 30 00:39 epd28.bin
FILE -rw-r--r-- 1183577 Dec 17 16:07 epd29.asn
FILE -rw-r--r-- 398119 Dec 17 16:10 epd29.bin
Location: /repository/EPD/db
FILE -rw-r--r-- 236892 Aug 22 17:46 epd28.dat
FILE -rw-r--r-- 49307 Aug 22 17:47 epd28.doc
FILE -rw-r--r-- 240950 Dec 17 16:13 epd29.dat
FILE -rw-r--r-- 49664 Dec 17 16:13 epd29.doc
FILE -rw-r--r-- 676489 Dec 17 16:05 epd29.seq
Location: /repository/EPD/ssa
FILE -rw-r--r-- 77657 Aug 30 01:44 epd28.chk
FILE -rw-r--r-- 79520 Dec 17 16:39 epd29.chk
