I am trying to install BLAST on a IBM RS/6000.
I already have succeed in installing ncbitools (using the 370 confi
guration), gish and dfa.
So, I am trying to build blast but make all generates a strange
message:
# make all
ln -s ../NCBI .
ln -s ../GISH .
ln -s ../DFA .
cd lib; make CC="cc" CCOPT="-g" OPTIONS=" -DREFINED_STATS "
cc -g -I../include -I../NCBI/include -I../GISH/include -I../DFA
-DREFINED_STATS -c banner.c
"../include/blast.h", line 169.0: 1506-236 (W) Macro name NCHUNKS has
been redefined.
"../include/shmutil.h", line 14.15: 1506-046 (S) Syntax error.
"../include/blast.h", line 349.11: 1506-046 (S) Syntax error.
"../include/blast.h", line 349.23: 1506-030 (S) Identifier mfile cannot
be redeclared.
"../include/blast.h", line 472.9: 1506-132 (S) Function fatal cannot be
redeclared.
"../include/blast.h", line 480.9: 1506-132 (S) Function TickNext cannot
be redeclared.
make: 1254-004 The error code from the last command is 1.
Make Quitting.
make: 1254-004 The error code from the last command is 2.
Make Quitting.
# cat include/shmutil.h
1 #ifndef __SHMUTIL_H__
2 #define __SHMUTIL_H__
3
4 #ifdef USE_SHM
5 typedef struct shm_dat {
6 char *filename;
7 key_t key;
8 long filesize;
9 FILE *fp;
10 int shmid, semid, msqid;
11 void *shmaddr;
12 } shm_dat;
13 #else
14 typedef char *shm_dat; <-- What's wrong?
15 #endif =============
16
17
18 extern int shmexists();
19 extern shm_dat *shm_attfile PROTO((char *filename, char *mode, int
verbose));
20 extern void *shm_addr PROTO((shm_dat *));
21 extern shm_dat *shm_loadfile PROTO((char *filename, int mmode, int
smode, int qmode, int lockfile, int verbose));
23 extern int shm_sendto PROTO((char *filename, int sig));
24 extern int shm_sendtokey PROTO((key_t key, int sig));
25
26 #endif /* !__SHMUTIL_H__ */
I don't understand what happens.
Please mail-me if you have an idea or if you already have installed
BLAST on a RS6K.
Thanx.
--
---------------------------------------------------------------------
Laurent Mouchard (lm) | C R I H A N
| Centre de Ressources Informatiques
