I would like some information on sequence alignment
programs. Specifically, I've been using Multalin to
align short, newly-sequenced DNA stretches to a much
larger consensus sequence. I'm told that Multalin is
not the program of choice for doing this, and that perhaps
"R-Align" (spelling?) would be better.
Could someone direct me to an appropriate ftp server
address for this program, or instead recommend something
I would prefer it to be DOS-based (not out of choice, but
because that's what we've got - DOS machines). But since
I can occasionally access a Mac IIsi, anything in that
direction is appreciated as well.
Bruce Ramsey, Ph.D.
Marine Gene Probe Lab
Dept. of Biology
"nbr at ac.dal.ca"