In article <4981 at lure.latrobe.edu.au> MICPRF at lure.latrobe.edu.au writes:
> I recently ported to my unix box and to a VAX the sequence
>alignment program called align, found in align.ARC in Don Gilbert's
>great IuBio archive. Unfortunately, on both machines when I run the
>program the alignment output for 2 protein sequences contained in 2
>input files always consists of both sequences listed one after the other
I don't use this align program myself, but have gotten it to work, at
least on simple dna sequences. I had to fiddle with it a bit. You might
want to try my revision, which runs on Iubio VMS Vax. See align1.arc
in directory [archive.molbio.align] on Iubio.bio.indiana.edu.
-- Don
--
Don Gilbert gilbertd at cricket.bio.indiana.edu
biocomputing office, biology dept., indiana univ., bloomington, in 47405
