IUBio

Status of direct genomic sequencing

Bruce Roe BROE at aardvark.ucs.ou.edu
Thu Feb 3 10:19:25 EST 2000


Hi,
	Sorry, I'm at Oklahoma and guess all the colonies look the same from the
other side of the pond... :-) 
	The URL on my web site for this info is:

		http://www.genome.ou.edu/big_dyes_bact.html

Cheers,
--bruce
*************************************************************************
Bruce A. Roe, Ph.D  George Lynn Cross Research Professor
                    Department of Chemistry and Biochemistry
                    University of Oklahoma, Norman, OK 73019-0370, U.S.A.
Phone: (405) 325-4912 or 7610;  FAX: (405) 325-7762;  e-mail: broe at ou.edu
********************** http://www.genome.ou.edu/ ************************

 You write: 
=> Return-path: <owner-autoseq at hgmp.mrc.ac.uk>
=> Received: from mercury.hgmp.mrc.ac.uk (mercury.hgmp.mrc.ac.uk [193.62.192.80])
=>  by aardvark.ucs.ou.edu (PMDF V5.2-27 #39381)
=>  with ESMTP id <01JLGO8QDOIG00A6A8 at aardvark.ucs.ou.edu> for
=>  broe at aardvark.ucs.ou.edu (ORCPT rfc822;broe at aardvark.ucs.ou.edu); Thu,
=>  3 Feb 2000 07:30:18 CST
=> Received: by mercury.hgmp.mrc.ac.uk (Postfix)	id C0C7117C47; Thu,
=>  03 Feb 2000 13:05:49 +0000 (GMT)
=> Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 110)
=>  id 7E59817AF1; Thu, 03 Feb 2000 13:05:27 +0000 (GMT)
=> Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 1)
=>  id CD07317AF1; Thu, 03 Feb 2000 12:23:40 +0000 (GMT)
=> Date: Thu, 03 Feb 2000 11:40:18 +0000 (GMT)
=> From: Dr H Crooke <hcrooke at hgmp.mrc.ac.uk>
=> Subject: Re: Status of direct genomic sequencing
=> Sender: owner-autoseq at hgmp.mrc.ac.uk
=> To: autoseq at net.bio.net
=> Message-id: <20000203122340.CD07317AF1 at mercury.hgmp.mrc.ac.uk>
=> Precedence: bulk
=> Newsgroups: bionet.genome.autosequencing
=> Original-recipient: rfc822;broe at aardvark.ucs.ou.edu
=> 
=> In article <875t52$bse$1 at mercury.hgmp.mrc.ac.uk>,
=> 	ed_taboada at hotmail.com writes:
=> > Hi folks,
=> > 
=> > could someone point me to literature outlining the current status of
=> > direct genomic sequencing?  I've been out of the sequencing loop for the
=> > last couple of years and would like to know if there are reliable
=> > protocols being used to generate sequence data from genomic DNA using
=> > gene specific primers. We are interested in determining the allele of a
=> > particular gene in a large number of bacterial isolates. We were
=> > leaning towards PCR and hybridization with allele-specific probes but
=> > someone mentioned that we might want to try direct sequencing instead
=> > and we are definitely intrigued. What are people's views on this ?
=> > 
=> > thanks in advance,
=> > 
=> > Ed
=> > 
=> > 
=> > Sent via Deja.com http://www.deja.com/
=> > Before you buy.
=> > ---
=> > 
=> There are protocols available at Washington (Bruce Roe) I think and Cheryl Heiner (ABI). I find genomic sequencing reasonably reliable but I have way to go to perfect it.
=> 
=> Richard
=> r.dobson at microscience.com
=> 
=> 


---






More information about the Autoseq mailing list

Send comments to us at biosci-help [At] net.bio.net