IUBio

Alignment of sequences of dif length

Alan Wilton dna at unsw.edu.au
Fri Feb 26 19:48:01 EST 1999


Dear sequencers,

Can anyone recommend a program that will extract a region of high
similarity from a bunch of sequences of different length and then do
multiple alignment on them?
Even an 'in house' protocol on how to go from BLAST matches,
then extracting regions of similarity to put into a
multiple alignment program would do?

Thanks in advance,

Alan


----------------------------------------------
Alan Wilton
School of Biochemistry and Molecular Genetics
University of New South Wales
Sydney  NSW  2052
Australia

Phone	+61 (2) 9385 2019
Fax   	+61 (2) 9385 1483
Email 	a.wilton at unsw.edu.au





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