John E. Blume jblume at ix.netcom.com
Tue Jun 30 15:25:11 EST 1998

Dr. Jones:

Sequencher has served my group well for several years. The current version
is fairly robust for assembly on our medium scale projects (10 - 20 kb by
shotgun sequencing), but the lack of any usage of quality calls from
traces (ala phred,phrap,consed) is a disadvantage for higher throughput

GeneCodes has a demo if you want to give it a test drive.


John E. Blume, PhD
Head of Genomics
Metabolex, Inc.

In article <6n8vda$ldj at net.bio.net>, Dr Mick Jones <mjones at rpms.ac.uk> wrote:

> Please could anybody give me some advice on which assembly package to
> purchase. Has anybody tried Sequencher? If so, any views? Are there any
> specific draw backs to it? Is there a better package?
> Thanks
> --
> _____________________________________________________________________
> Dr M D Jones                      Tel: 081-383-3328 (+44-81-383-3328)
> Department of Virology          FAX: 081-383-2299 (+44-81-383-2299)
> RPMS,  Du Cane Road              Email: mjones at rpms.ac.uk
> London,  W12 0NN,  UK
> URL: http://www.rpms.ac.uk/departments/virology/virolhome.html
> ***********************************************************
> "To Infinity and Beyond."   Buzz Lightyear (Toy Story)
> "Crackin' toast, Gromit."    Wallace (The Wrong Trousers)
> _____________________________________________________________________

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