sorry
i do not reproduce the error
acedb> parse
// Type in your data in .ace format, then CTRL-D to finish
Protein : Q08062
Title "Malate dehydrogenase, cytoplasmic."
Peptide Q08062 40
Peptide : Q08062
MATQTAVTATTVPQGSPSVTGSASQGGILNSARQFFSLAAPKVEKDKEFSFRFLTSP
LRSKPAATVNADNFYMYACGSINMP
// 2 objects read with 0 errors
// 2 Active Objects
acedb>
no problem seen
i can then visualize the data
acedb> find protein Q08062
// Found 1 objects in this class
// 1 Active Objects
acedb> pep
>Q08062
MATQTAVTATTVPQGSPSVTGSASQGGILNSARQFFSLAAPKVEKDKEFS
FRFLTSPLRSKPAATVNADNFYMYACGSINMP
// 1 object dumped// 1 Active Objects
acedb>
jean
>To: bionet-software-acedb at net.bio.net>From: Qunfeng Dong <qfdong at iastate.edu>
>Subject: Peptide
>Date: Mon, 21 Jan 2002 09:44:07 +0000 (GMT)
>X-Virus-Scanned: by amavisd-milter ( http://amavis.org/ )
>>>>Hi there,
>>Somebody must have asked this question before. I am sorry I have to ask this
>because Surprisingly I can't find any document describing how to load protein
>sequence into AceDB. Isn't the usage of Peptide the same as DNA? Please help!
>>Qunfeng
>ps.what's wrong with the following simple ace file?
>When I tried to load this file, xace hangs at
>Item: 2 Q08062
>Line: 4 (49%)
>Pased: 2
>OK: 2
>Errors: 0
>>with NO error message. Why?
>>------------------------------------------------------
>Protein : Q08062
>Title "Malate dehydrogenase, cytoplasmic."
>Peptide Q08062 40
>>Peptide : Q08062
>MATQTAVTATTVPQGSPSVTGSASQGGILNSARQFFSLAAPKVEKDKEFSFRFLTSP
>LRSKPAATVNADNFYMYACGSINMP
>------------------------------------------------------
>>If I replaced the above seq with
>makepmrvlvtgaagqigyalvpmiargvmlgadqpvilhmldippaaealngvkmelvd
>>then I got error message:
>ERROR - array parse error, near line 0 while parsing "Peptide : Q08062", error
>was: peptideParse error at line 8 in Q08062 : bad char m(0x6d)
>>>Please help!
>>Qunfeng
>>>
