question about Grid_show (fwd)

Ed Griffiths edgrif at sanger.ac.uk
Tue Oct 17 04:01:39 EST 2000

I have forwarded this for Jing Yu, please send any direct replies to him at:

jingyu at dnalandmarks.ca

not me !!


---------- Forwarded message ----------
Date: Thu, 12 Oct 2000 16:29:59 -0400
From: Jing Yu <jingyu at dnalandmarks.ca>
To: acedb at sanger.ac.uk
Subject: question about Grid_show

Hello acedb newsletter group members,

I hope here is the right place to send this mail, since I don't know
anywhere else I may get the help.

I got a problem when I recently tried to load my first "sample" Grid
data.  The .ace files are fine when they were read into ACEDB and the
text information displays fine, but when I tried to open the grid
display, I got message like this: Can't get Grid_display : "FATAL ERROR
reported by program xace, in file graphxt.c at line 1051: text Bounds
called on invalid graph type2".   I don't know what's the problem and
how to solve it.  Could anyone give me help on that?  For the
convenience, a copy of the related ace file I used as my "sample" is
attached as the following.  Thank you for your help.


Jing Yu
from DNA LandMarks

Grid : BpcDNAII.1
Type 384_well
Lines_at     3  4
Space_at     12  8
View      GRID-1
Row 1 Clone  DLM1  DLM2  DLM3  DLM4  DLM5  DLM6  DLM7  DLM8  DLM9
DLM10  DLM11  DLM12  DLM13  DLM14  DLM15  DLM16  DLM17  DLM18  DLM19
DLM20  DLM21  DLM22  DLM23  DLM24
Row 2 Clone  DLM25  DLM26  DLM27  DLM28  DLM29  DLM30  DLM31  DLM32
DLM33  DLM34  DLM35  DLM36  DLM37  DLM38  DLM39  DLM40  DLM41  DLM42
DLM43  DLM44  DLM45  DLM46  DLM47  DLM48
Row 3 Clone  DLM49  DLM50  DLM51  DLM52  DLM53  DLM54  DLM55  DLM56
DLM57  DLM58  DLM59  DLM60  DLM61  DLM62  DLM63  DLM64  DLM65  DLM66
DLM67  DLM68  DLM69  DLM70  DLM71  DLM72
Row 4 Clone  DLM73  DLM74  DLM75  DLM76  DLM77  DLM78  DLM79  DLM80
DLM81  DLM82  DLM83  DLM84  DLM85  DLM86  DLM87  DLM88  DLM89  DLM90
DLM91  DLM92  DLM93  DLM94  DLM95  DLM96
Row 5  Clone  DLM97  DLM98  DLM99  DLM100  DLM101  DLM102  DLM103
DLM104  DLM105  DLM106  DLM107  DLM108  DLM109  DLM110  DLM111  DLM112
DLM113  DLM114  DLM115  DLM116  DLM117  DLM118  DLM119  DLM120
Row 6  Clone    DLM121  DLM122  DLM123  DLM124  DLM125  DLM126  DLM127
DLM128  DLM129  DLM130  DLM131  DLM132  DLM133  DLM134  DLM135  DLM136
DLM137  DLM138  DLM139  DLM140  DLM141  DLM142  DLM143  DLM144
Row 7  Clone    DLM145  DLM146  DLM147  DLM148  DLM149  DLM150  DLM151
DLM152  DLM153  DLM154  DLM155  DLM156  DLM157  DLM158  DLM159  DLM160
DLM161  DLM162  DLM163  DLM164  DLM165  DLM166  DLM167  DLM168
Row 8  Clone    DLM169  DLM170  DLM171  DLM172  DLM173  DLM174  DLM175
DLM176  DLM177  DLM178  DLM179  DLM180  DLM181  DLM182  DLM183  DLM184
DLM185  DLM186  DLM187  DLM188  DLM189  DLM190  DLM191  DLM192
Row 9  Clone    DLM193  -  DLM194  DLM195  DLM196  DLM197  DLM198
DLM199  DLM200  DLM201  DLM202  DLM203  DLM204  DLM205  DLM206  DLM207
DLM208  DLM209  DLM210  DLM211  DLM212  DLM213  DLM214  -
Row 10  Clone    DLM215  DLM216  DLM217  DLM218  DLM219  DLM220  DLM221
DLM222  DLM223  DLM224  DLM225  DLM226  DLM227  DLM228  DLM229  DLM230
DLM231  DLM232  DLM233  DLM234  DLM235  DLM236  DLM237  DLM238
Row 11  Clone    DLM239  DLM240  DLM241  DLM242  DLM243  DLM244  DLM245
DLM246  DLM247  DLM248  DLM249  DLM250  DLM251  DLM252  DLM253  DLM254
DLM255  DLM256  DLM257  DLM258  DLM259  DLM260  DLM261  DLM262
Row 12  Clone    DLM263  DLM264  DLM265  DLM266  DLM267  DLM268  DLM269
DLM270  DLM271  DLM272  DLM273  DLM274  DLM275  DLM276  DLM277  DLM278
DLM279  DLM280  DLM281  DLM282  DLM283  DLM284  DLM285  DLM286
Row 13  Clone    DLM287  DLM288  DLM289  DLM290  DLM291  DLM292  DLM293
DLM294  DLM295  DLM296  DLM297  DLM298  DLM299  DLM300  -  DLM301
DLM302  DLM303  DLM304  -  DLM305  DLM306  DLM307  DLM308
Row 14  Clone    DLM309  DLM310  DLM311  DLM312  DLM313  DLM314  DLM315
DLM316  DLM317  DLM318  DLM319  DLM320  DLM321  DLM322  DLM323  DLM324
DLM325  DLM326  DLM327  DLM328  DLM329  DLM330  DLM331  DLM332
Row 15  Clone    DLM333  DLM334  DLM335  DLM336  DLM337  DLM338  DLM339
DLM340  DLM341  DLM342  DLM343  DLM344  DLM345  DLM346  DLM347  DLM348
DLM349  DLM350  DLM351  DLM352  DLM353  DLM354  DLM355  DLM356
Row 16  Clone    DLM357  DLM358  DLM359  DLM360  DLM361  DLM362  DLM363
DLM364  DLM365  DLM366  DLM367  DLM368  DLM369  DLM370  DLM371  DLM372
DLM373  DLM374  DLM375  DLM376  -  -  -  -

View : "GRID-1"
Grid_map  2 Colour BLUE
Grid_map  2 Surround_colour GREEN
Grid_map  2 Tag "Hybridizes_to"
Grid_map  1 Colour LIGHTBLUE
Grid_map  1 Surround_colour YELLOW
Grid_map  1 Tag "Hybridizes_weak"
Grid_edit_default  "Hybridizes_to"
Grid_edit_menu  "Hybridizes_weak"
Grid_edit_menu  "Hybridizes_to"

Clone : 1A1
Gridded BpcDNAII.1
Hybridizes_to 1A1 BpcDNAII.1
Hybridizes_weak 1AA1 BpcDNAII.1
Sequence DLM1.seq

Clone : -
Gridded BpcDNAII.1
Remark "empty well"

Sequence : DLM1.seq
DNA DLM1.seq 1168

DNA DLM1.seq
GGATTCTCGTAATCACACTTCTC... (cut off the rest sequence in this mail)

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