In article <833iqu$lus$1 at nnrp1.deja.com>,
<schwartz at uclink4.berkeley.edu> wrote:
>Hi All,
>>I was wondering if there is a parser for Blast2, gapped blast?
> I have been using ungapped blast and MSPCrunch to parse it into
>ACeDB format and was just wondering if there is a newer version?
>(I can't seem to find Eric Sonhammer's current ftp site.)
The latyest version of MSPcrunch certainly supports BLAST 2. I was
trying it out yesterday! You can download it from:
ftp://ftp.cgr.ki.se/pub/prog/MSPcrunch+Blixem
Tim.
