In article <4nsehv$nhj at mserv1.dl.ac.uk> mieg at kaa.crbm.cnrs-mop.fr (Danielle et jean Thierry-Mieg) writes:
>>please, who has a good embl to ace script ?
>merci
Jean (and anyone else that wants :-)
Check out ftp://ftp.biochem.kth.se/pub/acetools/embl2ace.pl.gz
This is a perl script I use for automatically pulling in EMBL records from our
xndt feed into MycDB. It is currently in a state of flux (the 'published
version' is 2.1, but I'm currently reworking it completely, to a more
'object'-oriented version, or I guess HASH-oriented is a better
word... Unfortunately I haven't got this in a working state yet.)
embl2ace.pl will take one or more records and perform all the conversion into
Sequence, Paper and DNA ace objects; it splits out CDS's and other subsequences.
Any questions and suggestions to
Staffan Bergh
Biochemistry, KTH, S-100 44 Stockholm, Sweden
email: staffan at biochem.kth.se + Don't let that horse eat that violin
phone: int+46 8 790 9230 + cried Chagall's mother
fax: int+46 8 24 54 52 + but he kept right on painting
+ -- Lawrence Ferlinghetti
<A HREF="http://www.biochem.kth.se">Webmaster</A> and
<A HREF="http://www.biochem.kth.se/MycDB.html">MycDB maintainer</A>
