IUBio

Sequence searches

Detlef Wolf D.Wolf at dkfz-heidelberg.de
Sat Sep 24 09:52:42 EST 1994


>   find Sequence DNA=*tgcggctgag*
> doesn't find anything, so I must be barking up the wrong tree.

this looks for a sequence whose _name_ contains tgcggctgag, so your
assumption is right.

Perhaps in future ACEDB could treat the DNA class like LongText and
search DNA, too, when clicking on the "Long Search" button in the main
window.

For the time being you can e.g. click on class DNA in the main window,
then in the main KeySet choose "Ace dump" from the menu, then use
emacs or whatever unix tool on the resulting .ace file.

regards
Detlef




More information about the Acedb mailing list

Send comments to us at biosci-help [At] net.bio.net