IUBio

PJ694A in a two hybrid screen

Barry Young byoung at plato.wadham.ox.ac.uk
Mon Mar 6 17:37:32 EST 2000


On 1 Mar 2000 20:33:15 -0000, David Keszenman-Pereyra 
<D.K-Pereyra at sheffield.ac.uk> wrote:
>"does anyone know, when your are using PJ694A for a two hybrid, how can I
>determine true positiv in the best way further? I did two hybrid  screen
>with a good transformation efficiency. After selection on -His omission
>plates I got 400 positives clones. I replica plate this to -Ade an I got
>several clones with different color and size. Some are red and others be
>white to brown. What is now the best way to determin ethe true positives.
>One more question, have anyone a very good positiv control plasmid but p53
>largeT? Thank for answering
>Best reguards
>Richard"
>
>If the bait plasmid is URA3 and the genomic library is LEU2:
>
>Select  for transformants on -UL (-ura and -leucine)
>Replica plate on -ULA (-UL and -adenine) and/or -ULH-3AT (-UL and -histidine plus 3-
>amino 1,2,4 trizole)

If you've got a lot of candidates at this stage (and it sounds like you have), 
you can discard any bait-independent positives by streaking clones on to FOA-Ade
media (as long as your bait is URA3, e.g. pGBDU-C1). Anything that grows on this
is activating GAL-ADE2in the absence of bait, so you can ditch these. You can 
also get rid of any clones that are flaky and flocculent in liquid culture - 
you'll get the feel for these once you've done a few screens! I find that these 
stepes tend to reduce the number of clones to something vaguely sensible (e.g. 
>200 to 40-50).

If anyone hasn't had Philip James update e-mail about PJ69-4A, I can post it 
here, as it contained a few useful hints.

Barry

>Replica plate positive clones (grown on -ULA and -ULH+3AT) on -UL plus alpha GAL (5-
>bromo-4chloro-3-indolyl-alpha-D-galactopyranoside)(either spread 100 ul of 2 mg/ml 
>alpha GAL over the entire surface of a  -UL plate using a glass spreader or add 1 ml of 
>20 mg/ml to a 1000 ml -UL agar medium at 55 C and pour plates).
>
>Postive candidates are blue and grown on -ULA and -ULH+3AT
>
>Replica plate on FOA-L (FOA plates minus leucine)
>Replica plate on -L
>                              -UL
>                              -LA
>                              -LH
>
>Positive clones are white on -L and cannot grown on -UL, -LA and -LH
>
>
>
>Good luck !!!!
>
>David Keszenman-Pereyra 
>University of Sheffield
>Department of Molecular Biology and Biotechnology, D38
>Firth Court, Western Bank, Sheffield S10 2TN
>UK

-- 
Barry Young
School of Biological Sciences
University of Manchester
Manchester
UK
---





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