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New Saccharomyces Sequences 03/24/98

SGD Sequences yeast-seq at genome.stanford.edu
Tue Mar 24 07:39:38 EST 1998


====================== New DNA Sequences =======================

P2MFLP      M23380      144bp    DNA      PLN      20-MAR-1998
    Saccharomyces cerevisiae 2 micron yeast plasmid, cleavage of linear and
     circular substrate by FLP and His-305-mutant FLP.
    FLP protein; recombinase.

SCY16889    Y16889     1389bp    DNA      PLN      19-MAR-1998
    Saccharomyces cerevisiae ULA1 gene.
    ULA1 gene; ULA1.

SCY16890    Y16890      307bp    DNA      PLN      19-MAR-1998
    Saccharomyces cerevisiae RUB1 gene.
    rub1 gene; ubiquitin-like protein; RUB1.

SCY16891    Y16891      900bp    DNA      PLN      19-MAR-1998
    Saccharomyces cerevisiae UBA3 gene.
    UBA3 gene; UBA3; ubiquitin-like protein activating enzyme.

==================== Updated DNA Sequences =====================

SCYKL200C   Z28200 Y13137     2723bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKL200c.
    MNN4.

SCYKL202W   Z28201 Y13137     2554bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKL202w.
    MNN4.

=========== Updated Sequence Features/Annotations  =============

SCYKL013C   Z28013 Y13137     1396bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKL013c.
    ARC19.

SCYKL033W   Z28033 Y13137     5958bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKL033w.
    tV(GTT)KL1 - systematic name.

SCYKL034W   Z28034 Y13137     4064bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKL034w.

SCYKL041W   Z28041 Y13137     1490bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKL041w.
    VPS24.

SCYKL053W   Z28052 Y13137     2558bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKL053w.

SCYKL054C   Z28054 Y13137     3414bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKL054c.

SCYKL055C   Z28055 Y13137     1621bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKL055c.
    OAR1.

SCYKL078W   Z28078 Y13137     2879bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKL078w.
    JA2.

SCYKL117W   Z28117 Y13137     1952bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKL117w.
    tA(GCH)KL - systematic name; NAC1.

SCYKL153W   Z28152 Y13137     2581bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKL153w.
    tR(AGR)KL - systematic name; GPM1.

SCYKL154W   Z28154 Y13137     2257bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKL154w.
    tR(AGR)KL - systematic name.

SCYKL161C   Z28161 Y13137     4430bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKL161c.
    (MLP1).

SCYKL165C   Z28165 Y13137     6088bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKL165c.
    MCD4; tE(GAA)KL - systematic name.

SCYKL168C   Z28168 Y13137     2652bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKL168c.
    KKQ8.

SCYKL170W   Z28169 Y13137     1026bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKL170w.
    MRPL38.

SCYKL173W   Z28173 Y13137     3522bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKL173w.
    SNU114.

SCYKL179C   Z28179 Y13137     3331bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKL179c.
    RPL17A.

SCYKL180W   Z28180 Y13137     1864bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKL180w.
    RPL17A.

SCYKL184W   Z28184 Y13137     2455bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKL184w.
    SPE1.

SCYKL188C   Z28188 Y13137     3380bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKL188c.
    PXA2.

SCYKL192C   Z28192 Y13137     1152bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKL192c.
    ACP1.

SCYKL196C   Z28196 Y13137     1883bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKL196c.
    tN(AAY)KL - systematic name; YKT6.

SCYKL197C   Z28197 Y13137     4713bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKL197c.
    PEX1; tN(AAY)KL - systematic name.

SCYKL208W   Z28208 Y13137     1811bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKL208w.
    tT(ACG)KL - systematic name; CBT1.

SCYKR004C   Z28229 Y13137     1793bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKR004c.
    ECM9.

SCYKR008W   Z28233 Y13137     2363bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKR008w.
    RSC4.

SCYKR010C   Z28235 Y13137     4580bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKR010c.
    tL(TTG)KR - systematic name; TOF2.

SCYKR024C   Z28249 Y13137     2758bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKR024c.
    DBP7.

SCYKR026C   Z28251 Y13137     2745bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKR026c.
    GCN3; tR(CGH)KR - systematic name.

SCYKR027W   Z28252 Y13137     4601bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKR027w.
    tR(CGH)KR - systematic name.

SCYKR057W   Z28282 Y13137     1875bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKR057w.
    RPS21A.

SCYKR058W   Z28283 Y13137     2984bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKR058w.
    RPS21A; GLG1.

SCYKR076W   Z28301 Y13137     2902bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKR076w.
    ECM4.

SCYKR094C   Z28319 Y13137     2269bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKR094c.
    RPL40B.

SCYKR095W   Z28320 Y13137     8050bp    DNA      PLN      18-MAR-1998
    S.cerevisiae chromosome XI reading frame ORF YKR095w.
    RPL40B; MLP1.


Please note that new sequences take about a week to appear in SGD.  To
obtain any of the yeast GenBank sequences use the NCBI retrieve e-mail
server, retrieve at ncbi.nlm.nih.gov - send the word help and
instructions will be returned.
  World Wide Web links for sequences:
     Only Yeast:  http://genome-www.stanford.edu/cgi-bin/genbank_search
  BLAST & FASTA:  http://genome-www.stanford.edu/Saccharomyces/
 NCBI (GenBank):  http://www.ncbi.nlm.nih.gov/Web/Search/
     EBI (EMBL):  http://www.ebi.ac.uk/ebi_docs/embl_db/ebi/topembl.html
           DDBJ:  http://ftp2.ddbj.nig.ac.jp:8000/cgi-bin/getent/





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