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New Saccharomyces Sequences 03/13/97

SGD Sequences yeast-seq at GENOME.STANFORD.EDU
Thu Mar 13 07:13:36 EST 1997


=========== Updated Features/Annotations  =============

SC130KBXV   X94335   129528bp    DNA      PLN      11-MAR-1997
    S.cerevisiae 130kb DNA fragment from chromosome XV.
    ARS; delta element; delta remnant; open reading frame; tRNA-Asn;
     tRNA-Asp; tRNA-Gly; YOR2964c; YOR3116w; YOR3120w; YOR3124w; YOR3141c;
     transfer RNA-Asn; YOR3151w; YOR3154c; YOR3157c; YOR3160w; YOR3162c;
     YOR3165w; YOR3170c; YOR3172w; YOR3174c; YOR3177w; YOR3180c; YOR3182c;
     YOR3189w; YOR3193c; YOR3205w; YOR3211c; YOR3214w; YOR3220w; YOR3224w;
     YOR3227w; YOR3231w; YOR3234w; YOR3237w; YOR3240w; YOR3244w; YOR3248w;
     YOR3251c; YOR3254c; YOR3258w; YOR3263w; YOR3266c; YOR3269w; YOR3275c;
     YOR3278c; YOR3281c; YOR3284c; YOR3287c; YOR3290w; YOR3293c; YOR3296c;
     YOR3299c; tRNA-Asp; transfer RNA-Asp; YOR3311c; YOR3314w; YOR3317w;
     YOR3320w; YOR3326w; YOR3329c; YOR3332c; YOR3339w; YOR3348c; YOR3352w;
     tRNA-Gly-sup; transfer RNA-Gly-sup; YOR3367w; YOR3373c; YOR3510c;
     YOR3513c.

SC9934      Z48612    34586bp    DNA      PLN      11-MAR-1997
    S.cerevisiae chromosome IV cosmid 9934.
    adenylate; 5-aminolevulinic acid synthase; aconitate dehydratase; ADR1;
     Adr1p; RAD9; Rad9p; H2B1; H2b1p; H2A1; H2a1p; ADK1; Adk1p; SIR4; Sir4p;
     HEM1; Hem1p.

SCE9537     U18778    66030bp    DNA      PLN      12-MAR-1997
    Saccharomyces cerevisiae chromosome V cosmids 9537, 9581, 9495, 9867, and
     lambda clone 5898.
    MNN1; alpha-1,3-mannosyltransferase; YER002W; Yer002wp; PMI40;
     mannose-6-phosphate isomerase; YER004W; Yer004wp; YER005W; Yer005wp;
     YER006W; Yer006wp; PAC2; Pac2p; YER007C-A; Yel007c-ap; SEC3; Sec3p;
     NTF2; Nuclear Transport Factor 2; YER010C; Yer010cp; TIR1; Tir1p;
     tRNA-Glu; PRE1; 22.6 kDa subunit of proteinase yscE; PRP22; pre-mRNA
     splicing factor RNA helicase; HEM14; protoporphyrinogen oxidase; FAA2;
     Long-chain fatty acid CoA ligase; BIM1; Microtubule-Binding Protein;
     AFG3; Afg3p; YER018C; Yer018cp; YER019W; Yer019wp; SEB2; Seb2p; GPA2;
     nucleotide binding regulatory protein; SUN2; proteosome subunit; SRB4;
     transcription factor; PRO3; delta 1-pyrroline-5-carboxylate reductase;
     YER024W; Yer024wp; GCD11; subunit gamma of translational initiation
     factor; eIF2; ; tRNA-His; CHO1; phosphatidylserine synthetase; GAL83;
     glucose repression protein; YER028C; Yer028cp; YER029C; Yer029cp;
     YER030W; Yer030wp; YPT31; Ypt31p; FIR1; Fir1p; CEN5.

SCPOS18     X83571      911bp    DNA      PLN      11-MAR-1997
    S.cerevisiae RPE gene.
    rep gene; Ribulose-5-phosphate-epimerase; RPE;
     Ribulose-5-Phosphate-Epimerase.

SCU43608    U43608     4259bp    DNA      PLN      11-MAR-1997
    Saccharomyces cerevisiae multicopy suppressor of los1-1 (SOL1) gene and
     para-aminobenzoate synthase (ABZ1) gene, complete cds.
    ABZ1; Abz1p; SOL1; Sol1p.

SCU46559    U46559     2194bp    DNA      PLN      11-MAR-1997
    Saccharomyces cerevisiae multicopy suppressor of los1-1 (SOL2) gene,
     complete cds.
    SOL2; Sol2p.

SCU46560    U46560     2275bp    DNA      PLN      11-MAR-1997
    Saccharomyces cerevisiae weak multicopy suppressor of los1-1 (SOL3) gene,
     complete cds.
    SOL3; Sol3p.

SCYJL121C   Z49396     1328bp    DNA      PLN      11-MAR-1997
    S.cerevisiae chromosome X reading frame ORF YJL121c.
    POS18.

YSCCDC10A   L16549     1466bp    DNA      PLN      12-MAR-1997
    Saccharomyces cerevisaie cell division cycle protein (CDC10) gene,
     complete cds.
    CDC10; cell division cycle protein.

YSCCDC11A   L16550     2101bp    DNA      PLN      12-MAR-1997
    Saccharomyces cerevisaie cell division cycle protein (CDC11) gene,
     complete cds.
    CDC11; cell division cycle protein.

YSCCDC12A   L16551     2009bp    DNA      PLN      12-MAR-1997
    Saccharomyces cerevisaie cell division cycle protein (CDC12) gene,
     complete cds.
    CDC12; cell division cycle protein.

YSCCDC3A    L16548     2569bp    DNA      PLN      12-MAR-1997
    Saccharomyces cerevisaie cell division cycle protein (CDC3) gene,
     complete cds.
    CDC3; cell division cycle protein.

YSCPSL1     L22204     5019bp    DNA      PLN      12-MAR-1997
    Saccharomyces cerevisiae profilin synthetic lethal (PSL1) gene, complete
     cds.
    PSL1; Psl1p.


Please note that new sequences take about a week to appear in SGD.  To
obtain any of the yeast GenBank sequences use the NCBI retrieve e-mail
server, retrieve at ncbi.nlm.nih.gov - send the word help and
instructions will be returned.
  World Wide Web links for sequences:
     Only Yeast:  http://genome-www.stanford.edu/cgi-bin/genbank_search
  BLAST & FASTA:  http://genome-www.stanford.edu/Saccharomyces/
 NCBI (GenBank):  http://www.ncbi.nlm.nih.gov/Web/Search/
     EBI (EMBL):  http://www.ebi.ac.uk/ebi_docs/embl_db/ebi/topembl.html
           DDBJ:  http://ftp2.ddbj.nig.ac.jp:8000/cgi-bin/getent/



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