IUBio

31/12/94 : Progress Report YEAST Genome Sequencing

Mike Cherry cherry at stout.Stanford.EDU
Fri Jan 6 11:59:02 EST 1995


In article <3eje1n$ksf at rc1.vub.ac.be>,
Mordant Philippe <pmordant at ben.vub.ac.be> wrote:
>
>CHR V (Public sequences) :  DAVIS  569 202 bp
>
>The complete sequence in Genbank format of chr V can be retrieved at the 
>WWW server of the Moose. To access this information using one of the many 
>WWW clients simply "Open URL" and enter the following information : 
>http://alces.med.umn.edu/yt/yeast-chr.html

Stew Scherer's system just contains a copy of the chromosome V file
produced and obtained from us and is not guaranteed to be the most
up-to-date.  A link to the SGD server for the chrV files is:

   ftp://genome-ftp.stanford.edu/pub/yeast/genome_seq/chrV/

or via Gopher to genome-gopher.stanford.edu look in the "S. cerevisiae
Genome Sequencing Results" folder.


>Nr   Cosmid   Accession   Size      Date
>              Number      (bp)
>
>1   YSCSYGP5   L11229     15 077     15/02/93
>2   YSCSYGP4   L11120      9 704     12/04/93
>3   YSCSYGP3   L11119      9 868     12/04/93
>4   YSCSYGP1   L10718     15 978     19/04/93
>5   YSCSYGP2   L10830     36 772     27/06/93
>6   9871,...   U18530     62 643     19/12/94
>7   9537,...   U18778     66 030     19/12/94
>8   8199,...   U18779     36 872     19/12/94
>9   9669,...   U18795     50 849     21/12/94
>10  9379,...   U18796     43 100     21/12/94
>11  6592,...   U18813     40 565     21/12/94
>12  3612,...   U18814      8 443     21/12/94
>13  9747,...   U18839     64 797     21/12/94
>14  9781,...   U18916     68 303     21/12/94
>15  8229,...   U18917     37 883     21/12/94
>16  9163,...   U18922     64 044     21/12/94
>      overlaps           -61 726     21/12/94
>                         --------------------
>                         569 202 bp  31/12/94

The first five entries are now obsolete and completely replaced by the
later entries. The YSCSYGP* entries will disappear from the databases
with the next GenBank and EMBL releases.

Mike



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