Colleagues,
I got an inquiry of a colleague (not woking at the Biozentrum, but
within our EMBnet services) on what fraction of the yeast genome is
sequenced, resp. available if a BLAST, FASTA or MPsrch request is
launched. I screened the archive and found the data recently posted
to the yeast bb. Just for the sake of a correct answer on the second
question, I would like to ask the following questions related to the
included posting.
Mordant Philippe (pmordant at rc1.vub.ac.be) wrote:
: *********************************************************************
: * *
: * IN EMBL + GENBANK + MIPS + SDB ON NOVEMBER 01, 1994 *
: * PROGRESS REPORT FOR THE SYSTEMATIC SEQUENCING OF THE YEAST GENOME *
: * *
: *********************************************************************
Does this include MIPS sequences which are kept confidential, i.e.
not being available to the non-MIPS-customer research community?
[...]
: ---------------------------------------------------------------------
: submitted estimated new in
: up today length october 94
: (kb) (kb) (%) (kb)
: ---------------------------------------------------------------------
[...]
: ----------------------------------------------------------------
: TOTAL YEAST GENOME 5687 12400 46% 669
: ----------------------------------------------------------------
[...]
As there is a considerable amount of yeast sequences already published
in the sequence database (with functions etc. assigned), what would be
a more customer-oriented guess on what fraction of sequences is available
to the community in the EMBL database?
Regards
Reinhard
--
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