Hello,
I am working on de Novo peptide sequencing with MS/MS data. I am
now trying to learn all the different ion types generated by the
MS/MS so that I can assign some probabilities to each terminal
ion type... say y, b, y-H2O, b-H2O, etc.
I have statistically obtained plots for the ferquency functions of:
- N-term charge +1
- C-term charge +1
- N-term charge +2
- C-term charge +2
What I need now is a very good peak detection algorithm that
considers random fluctuations and false peaks....
Can anybody helpme on this? I mean the algorithms....
thanx
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