IUBio

modified amino acids

GARAVELLI at NBRF.GEORGETOWN.EDU GARAVELLI at NBRF.GEORGETOWN.EDU
Tue Jan 19 17:30:37 EST 1999


On Mon, 18 Jan 1999, l.r.cooper asked:
i'm looking for a database, though even a table would suffice, of modified
amino acids. any suggestions?

The RESID Database of amino acid residues annotated as features in the Protein
Sequence Database has been distributed with the PIR-International Protein
Sequences Databases on CD-ROM for several years.  In September 1998, thanks
to the support of the National Science Foundation, the RESID Database was
made available on the Web through
  http://www-nbrf.georgetown.edu/pirwww/search/textresid.html
with a description available at
  http://www-nbrf.georgetown.edu/pirwww/dbinfo/resid.html
The current release 16.00 has 253 entries.  The database includes naturally
occurring post-translation modifications, along with the 22 different encoded
residues, that have been identified in sequences.  A number of other residues
found in the old CRC list had been detected in hydolysates but have never
been identified in sequences.
------------------------------------------------------------------------
                                 Dr. John S. Garavelli
                                 Associate Director
                                 Protein Information Resource
                                 National Biomedical Research Foundation
                                 Washington, DC  20007
                                 GARAVELLI at NBRF.GEORGETOWN.EDU



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