> I am trying to search for five or more residues amino acid on all
> proteins that the structures have been found. The results then can prove
> that "one sequence one structure" is correct or not...
That question was looked into years ago. See
W. Kabsch and C. Sander in PNAS 81:1075 (1984)
I.A. Wilson, et al. in PNAS 82: 5255 (1985)
The short answer is that identical sequences can can assume
different secondary structures.
Dan.
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Daniel M. Doran, Ph.D.
InterNet: DoranD at Rocbi.Dnet.Roche.Com Pharmaceutical Research -
Phone: +41-61-688-8270 New Technologies
+41-61-688-7080 F.Hoffmann-La Roche Ltd.
Fax: +41-61-688-1745 CH-4002 Basel, Switzerland
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