Blair Hedges notes in this newsgroup the availability of NJBOOT from Tom
Whittam and also a similar capability in a to-be-announced phylogenetic
analysis package from Masatoshi Nei's laboratory.
I should add that, by use of the bootstrap tool SEQBOOT together with the
DNA distance matrix program DNADIST and the Neighbor-Joining program NEIGHBOR,
users of my package PHYLIP, version 3.4, can also bootstrap neighbor-joining
trees. Other distance matrix methods such as Fitch-Margioliash, and other
non-distance methods can also be bootstrapped in similar fashion.
This has been possible since the release of PHYLIP version 3.4 in June, 1991.
Joe Felsenstein, Dept. of Genetics, Univ. of Washington, Seattle, WA 98195
Internet: joe at genetics.washington.edu (IP No. 184.108.40.206)
Bitnet/EARN: felsenst at uwavm