Dear ALL,
I have recently installed LINKAGE on our system and
was trying to interface output from LRP to our internal software.
I have a query regarding LRP which I would be grateful if you could
help with.
How does LRP obtain the individual LOD scores? As I gather it uses
stream.out and final.out but neither have the individual LOD scores
in them? Does LRP do any calculations internally? When I looked at the
stream.out and final.out files I can see it has the pedigree and LN 10
LIKE and LOG10 LIKE. When you ask LRP to display a table format it
gives you the proper LOD scores. The question is does it do that by
calculating internally within the code or is it displayed in another
file that I have overlooked.
I would be grateful for any help or suggestions regarding the way LRP
obtain its data.
Thanks.
Rifat.
rifat at icr.ac.uk
