To: Users of MAPMAKER/QTL
Re: Lod scores for QTL location data
I'm interested in getting a lod score or some other likelihood ratio value
for a QTL analyzed at a given map position within MAPMAKER/QTL. In the
output produced by default, there is a value printed for log-likelihood,
which appears to be the likelihood of the data at the location specified
under computed MLE values. Is there a way to print out the likelihood of
the data at the same location under the null hypothesis that there is no
QTL at this location?
